#include <AlgorithmRun.hh>
Public Member Functions | |
| AlgorithmRun (const AlgorithmPtr &algo) | |
| ~AlgorithmRun () | |
| int | initialize (int id, int comm_samples, const SamplerPtr &train_sampler, const SamplerPtr &test_sampler) |
| void | run () |
| void | stop () |
| void | createModel () |
| bool | running () const |
| int | getId () const |
| float | getProgress () const |
| double | getOmission () const |
| double | getCommission () const |
| double | getError (int type) const |
| Scalar | getValue (const Sample &x) const |
| int | calculateOmission () |
| int | calculateCommission () |
| AlgorithmPtr | getAlgorithm () |
| AlgorithmRun () | |
| AlgorithmRun (const AlgorithmPtr &alg) | |
| virtual | ~AlgorithmRun () |
| int | initialize (int id, int comm_samples, const SamplerPtr &train_sampler, const SamplerPtr &test_sampler, int nparam, AlgParameter *param, BSAlgorithmFactory *factory) |
| int | run () |
| int | iterate () |
| int | finalize () |
| int | done () const |
| bool | running () const |
| int | getId () const |
| float | getProgress () const |
| double | getOmission () const |
| double | getCommission () const |
| double | getError (int type) const |
| Scalar | getValue (const Sample &x) const |
| AlgorithmPtr | getAlgorithm () const |
| int | calculateOmission () |
| int | calculateCommission () |
Private Member Functions | |
| AlgorithmRun (const AlgorithmRun &) | |
| AlgorithmRun & | operator= (const AlgorithmRun &) |
| AlgorithmRun (const AlgorithmRun &) | |
| AlgorithmRun & | operator= (const AlgorithmRun &) |
Private Attributes | |
| AlgorithmPtr | _alg |
| Number of points used to calculate commission. | |
| int | _id |
| Algorithm used in this run. | |
| bool | _running |
| Identified for this particular garp run. | |
| double | _omission |
| Indicates whether the thread is running. | |
| double | _commission |
| Omission error for this run. | |
| int | _commission_samples |
| Commission error, approximated by area predicted present. | |
| SamplerPtr | _train_sampler |
| Number of points used to calculate commission. | |
| SamplerPtr | _test_sampler |
Detailed Description
Wraps up a single Algorithm run and its results (calculated error components). Also handles multi-threading aspects of computation.
Definition at line 47 of file AlgorithmRun.hh.
Constructor & Destructor Documentation
| AlgorithmRun::AlgorithmRun | ( | const AlgorithmPtr & | algo | ) |
Definition at line 53 of file AlgorithmRun.cpp.
Definition at line 67 of file AlgorithmRun.cpp.
| AlgorithmRun::AlgorithmRun | ( | const AlgorithmRun & | ) | [private] |
Definition at line 65 of file garp_run.cpp.
| AlgorithmRun::AlgorithmRun | ( | const AlgorithmPtr & | alg | ) |
| virtual AlgorithmRun::~AlgorithmRun | ( | ) | [virtual] |
| AlgorithmRun::AlgorithmRun | ( | const AlgorithmRun & | ) | [private] |
Member Function Documentation
Definition at line 130 of file AlgorithmRun.cpp.
References _alg, _commission, _commission_samples, and _train_sampler.
Referenced by AlgorithmRunThreadProc(), and createModel().
| int AlgorithmRun::calculateOmission | ( | ) |
Definition at line 165 of file AlgorithmRun.cpp.
References _alg, _omission, _test_sampler, and _train_sampler.
Referenced by AlgorithmRunThreadProc(), and createModel().
| int AlgorithmRun::calculateOmission | ( | ) |
| void AlgorithmRun::createModel | ( | ) |
Definition at line 107 of file AlgorithmRun.cpp.
References _alg, _commission, _omission, _train_sampler, ConfusionMatrix::calculate(), calculateCommission(), calculateOmission(), ConfusionMatrix::getCommissionError(), and ConfusionMatrix::getOmissionError().
Referenced by AlgorithmRunThreadProc().
| int AlgorithmRun::done | ( | ) | const |
Definition at line 141 of file garp_run.cpp.
References _alg.
Referenced by AlgorithmRunThreadProc().
| int AlgorithmRun::finalize | ( | ) |
Definition at line 149 of file garp_run.cpp.
References _running, and THREAD_END.
Referenced by AlgorithmRunThreadProc().
| AlgorithmPtr AlgorithmRun::getAlgorithm | ( | ) | const [inline] |
Definition at line 72 of file garp_run.hh.
References _alg.
| AlgorithmPtr AlgorithmRun::getAlgorithm | ( | ) | [inline] |
Definition at line 73 of file AlgorithmRun.hh.
References _alg.
Referenced by BestSubsets::_getConfiguration(), and AbstractBestSubsets::_getConfiguration().
| double AlgorithmRun::getCommission | ( | ) | const |
Definition at line 198 of file AlgorithmRun.cpp.
References _commission.
Referenced by printListOfRuns(), and BestSubsets::printListOfRuns().
| double AlgorithmRun::getCommission | ( | ) | const |
| double AlgorithmRun::getError | ( | int | type | ) | const |
Definition at line 202 of file AlgorithmRun.cpp.
References _commission, and _omission.
Referenced by AbstractBestSubsets::sortRuns(), and BestSubsets::sortRuns().
| double AlgorithmRun::getError | ( | int | type | ) | const |
| int AlgorithmRun::getId | ( | ) | const [inline] |
Definition at line 63 of file AlgorithmRun.hh.
References _id.
Referenced by printListOfRuns(), and BestSubsets::printListOfRuns().
| int AlgorithmRun::getId | ( | ) | const [inline] |
Definition at line 66 of file garp_run.hh.
References _id.
| double AlgorithmRun::getOmission | ( | ) | const |
Definition at line 194 of file AlgorithmRun.cpp.
References _omission.
Referenced by AbstractBestSubsets::numActiveThreads(), and BestSubsets::numActiveThreads().
| double AlgorithmRun::getOmission | ( | ) | const |
| float AlgorithmRun::getProgress | ( | ) | const |
Definition at line 126 of file AlgorithmRun.cpp.
References _alg.
Referenced by BestSubsets::getProgress(), and AbstractBestSubsets::getProgress().
| float AlgorithmRun::getProgress | ( | ) | const |
| double AlgorithmRun::getValue | ( | const Sample & | x | ) | const |
Definition at line 211 of file AlgorithmRun.cpp.
References _alg.
Referenced by BestSubsets::getValue(), and AbstractBestSubsets::getValue().
| Scalar AlgorithmRun::getValue | ( | const Sample & | x | ) | const |
| int AlgorithmRun::initialize | ( | int | id, |
| int | comm_samples, | ||
| const SamplerPtr & | train_sampler, | ||
| const SamplerPtr & | test_sampler | ||
| ) |
Definition at line 73 of file AlgorithmRun.cpp.
References _commission_samples, _id, _test_sampler, and _train_sampler.
Referenced by BestSubsets::iterate(), and AbstractBestSubsets::iterate().
| int AlgorithmRun::initialize | ( | int | id, |
| int | comm_samples, | ||
| const SamplerPtr & | train_sampler, | ||
| const SamplerPtr & | test_sampler, | ||
| int | nparam, | ||
| AlgParameter * | param, | ||
| BSAlgorithmFactory * | factory | ||
| ) |
Definition at line 98 of file garp_run.cpp.
References _alg, _commission_samples, _id, _test_sampler, _train_sampler, Log::debug(), BSAlgorithmFactory::getBSAlgorithm(), and Log::instance().
| int AlgorithmRun::iterate | ( | ) |
Definition at line 134 of file garp_run.cpp.
References _alg.
Referenced by AlgorithmRunThreadProc().
| AlgorithmRun& AlgorithmRun::operator= | ( | const AlgorithmRun & | ) | [private] |
| AlgorithmRun& AlgorithmRun::operator= | ( | const AlgorithmRun & | ) | [private] |
| int AlgorithmRun::run | ( | ) |
Definition at line 87 of file AlgorithmRun.cpp.
References _running, AlgorithmRunThreadProc(), and THREAD_START.
Referenced by BestSubsets::iterate(), and AbstractBestSubsets::iterate().
| int AlgorithmRun::run | ( | ) |
| bool AlgorithmRun::running | ( | ) | const |
Definition at line 101 of file AlgorithmRun.cpp.
References _running.
Referenced by AbstractBestSubsets::numActiveThreads(), and BestSubsets::numActiveThreads().
| bool AlgorithmRun::running | ( | ) | const |
| void AlgorithmRun::stop | ( | ) |
Definition at line 93 of file AlgorithmRun.cpp.
References _running, and THREAD_END.
Referenced by AlgorithmRunThreadProc().
Member Data Documentation
AlgorithmPtr AlgorithmRun::_alg [private] |
Number of points used to calculate commission.
Definition at line 77 of file AlgorithmRun.hh.
Referenced by calculateCommission(), calculateOmission(), createModel(), done(), getAlgorithm(), getProgress(), getValue(), initialize(), and iterate().
double AlgorithmRun::_commission [private] |
Omission error for this run.
Definition at line 82 of file AlgorithmRun.hh.
Referenced by calculateCommission(), createModel(), getCommission(), and getError().
int AlgorithmRun::_commission_samples [private] |
Commission error, approximated by area predicted present.
Definition at line 83 of file AlgorithmRun.hh.
Referenced by calculateCommission(), and initialize().
int AlgorithmRun::_id [private] |
Algorithm used in this run.
Definition at line 79 of file AlgorithmRun.hh.
Referenced by getId(), and initialize().
double AlgorithmRun::_omission [private] |
Indicates whether the thread is running.
Definition at line 81 of file AlgorithmRun.hh.
Referenced by calculateOmission(), createModel(), getError(), and getOmission().
bool AlgorithmRun::_running [private] |
Identified for this particular garp run.
Definition at line 80 of file AlgorithmRun.hh.
Referenced by finalize(), run(), running(), and stop().
SamplerPtr AlgorithmRun::_test_sampler [private] |
Definition at line 85 of file AlgorithmRun.hh.
Referenced by calculateOmission(), and initialize().
SamplerPtr AlgorithmRun::_train_sampler [private] |
Number of points used to calculate commission.
Algorithm used in this run.
Definition at line 84 of file AlgorithmRun.hh.
Referenced by calculateCommission(), calculateOmission(), createModel(), and initialize().
The documentation for this class was generated from the following files:
