EnvCellSet.h

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/* **************************************
 *  GARP Modeling Package
 *
 * **************************************
 *
 * Copyright (c), The Center for Research, University of Kansas, 2385 Irving Hill Road, Lawrence, KS 66044-4755, USA.
 * Copyright (C), David R.B. Stockwell of Symbiotik Pty. Ltd.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the license that is distributed with the software.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * license.txt file included with this software for more details.
 */

// EnvCellSet.h : Declaration of the CEnvCellSet

#ifndef __ENVCELLSET_H_
#define __ENVCELLSET_H_

#include "EnvCell.h"
#include "Utilities.h"

// ============================================================================
// EnvCellSet
// ============================================================================

class EnvCellSet
{
private:
  int intCount;
  int intSize;
  EnvCell ** objCells;

  bool resampled;

  // bioclim histograms
  BioclimHistogram * histogram;

public:
  EnvCellSet();
  EnvCellSet(int size);
  virtual ~EnvCellSet();

  void initialize(int size);

  void createBioclimHistogram();
  BioclimHistogram * getBioclimHistogram();

  EnvCellSet * resample();
  void resampleInPlace();

  int size();
  int count();
  int genes();

  void add(EnvCell * cell);
  EnvCell * get(int index);
};

// ============================================================================
#endif