EnvCellSet Class Reference

#include <EnvCellSet.h>

Collaboration diagram for EnvCellSet:

Public Member Functions
	EnvCellSet ()
	EnvCellSet (int size)
virtual	~EnvCellSet ()
void	initialize (int size)
void	createBioclimHistogram ()
BioclimHistogram *	getBioclimHistogram ()
EnvCellSet *	resample ()
void	resampleInPlace ()
int	size ()
int	count ()
int	genes ()
void	add (EnvCell *cell)
EnvCell *	get (int index)

Private Attributes
int	intCount
int	intSize
EnvCell **	objCells
bool	resampled
BioclimHistogram *	histogram

Detailed Description

Definition at line 30 of file EnvCellSet.h.

Constructor & Destructor Documentation

EnvCellSet::EnvCellSet

(

)

Definition at line 25 of file EnvCellSet.cpp.

References histogram, intCount, intSize, objCells, and resampled.

Referenced by resample().

EnvCellSet::EnvCellSet

(

int

size

)

Definition at line 37 of file EnvCellSet.cpp.

References histogram, initialize(), intCount, intSize, objCells, and resampled.

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EnvCellSet::~EnvCellSet ( )

virtual

Definition at line 51 of file EnvCellSet.cpp.

References histogram, intCount, objCells, resampled, and EnvCell::values.

Member Function Documentation

void EnvCellSet::add

(

EnvCell *

cell

)

Definition at line 154 of file EnvCellSet.cpp.

References intCount, intSize, and objCells.

Referenced by GarpAlgorithm::initialize(), and resample().

int EnvCellSet::count

(

)

Definition at line 139 of file EnvCellSet.cpp.

References intCount.

Referenced by Rule::initialize(), LogitRule::regression(), RuleSet::resetConfMatrix(), and RuleSet::verify().

void EnvCellSet::createBioclimHistogram

(

)

Definition at line 167 of file EnvCellSet.cpp.

References genes(), histogram, intCount, BioclimHistogram::matrix, objCells, BioclimHistogram::reset(), and EnvCell::values.

Referenced by GarpAlgorithm::initialize().

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int EnvCellSet::genes

(

)

Definition at line 124 of file EnvCellSet.cpp.

References intCount, objCells, and EnvCell::size().

Referenced by createBioclimHistogram().

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EnvCell * EnvCellSet::get

(

int

index

)

Definition at line 145 of file EnvCellSet.cpp.

References intCount, and objCells.

Referenced by Rule::initialize(), AtomicRule::initialize(), LogitRule::regression(), Rule::testWithData(), and RuleSet::verify().

BioclimHistogram * EnvCellSet::getBioclimHistogram

(

)

Definition at line 163 of file EnvCellSet.cpp.

References histogram.

Referenced by RangeRule::bioclimRange().

void EnvCellSet::initialize

(

int

size

)

Definition at line 116 of file EnvCellSet.cpp.

References intCount, intSize, objCells, and size().

Referenced by EnvCellSet(), and GarpAlgorithm::initialize().

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EnvCellSet * EnvCellSet::resample

(

)

Definition at line 100 of file EnvCellSet.cpp.

References add(), EnvCellSet(), intSize, objCells, GarpUtil::randint(), and resampled.

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void EnvCellSet::resampleInPlace

(

)

Definition at line 80 of file EnvCellSet.cpp.

References intSize, objCells, and GarpUtil::randint().

Referenced by GarpAlgorithm::generate().

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int EnvCellSet::size

(

)

Definition at line 133 of file EnvCellSet.cpp.

References intSize.

Referenced by initialize(), AtomicRule::initialize(), and Rule::testWithData().

Member Data Documentation

BioclimHistogram* EnvCellSet::histogram

private

Definition at line 40 of file EnvCellSet.h.

Referenced by createBioclimHistogram(), EnvCellSet(), getBioclimHistogram(), and ~EnvCellSet().

int EnvCellSet::intCount

private

Definition at line 33 of file EnvCellSet.h.

Referenced by add(), count(), createBioclimHistogram(), EnvCellSet(), genes(), get(), initialize(), and ~EnvCellSet().

int EnvCellSet::intSize

private

Definition at line 34 of file EnvCellSet.h.

Referenced by add(), EnvCellSet(), initialize(), resample(), resampleInPlace(), and size().

EnvCell** EnvCellSet::objCells

private

Definition at line 35 of file EnvCellSet.h.

Referenced by add(), createBioclimHistogram(), EnvCellSet(), genes(), get(), initialize(), resample(), resampleInPlace(), and ~EnvCellSet().

bool EnvCellSet::resampled

private

Definition at line 37 of file EnvCellSet.h.

Referenced by EnvCellSet(), resample(), and ~EnvCellSet().

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The documentation for this class was generated from the following files:

• EnvCellSet.h
• EnvCellSet.cpp