Here is a list of all class members with links to the classes they belong to:
- _ -
- _abortion_arg
: CallbackWrapper
- _abortion_callback
: CallbackWrapper
- _absence
: OpenModeller
, SamplerImpl
- _absences
: OccurrencesReader
, RequestFile
- _acc_limit
: Garp
- _accepts_any_model
: CapabilitiesInfo
- _accepts_om_model
: CapabilitiesInfo
- _accepts_om_template
: CapabilitiesInfo
- _activeRun
: AbstractBestSubsets
, BestSubsets
- _actualAreaStats
: OpenModeller
- _addAbsence()
: OccurrencesReader
- _addOccurrence()
: OccurrencesReader
- _addPresence()
: OccurrencesReader
- _adjustInterquartile()
: AquaMaps
- _agreement
: ConsensusAlgorithm
- _alg
: AlgorithmRun
, OpenModeller
- _alg_params
: BestSubsets
- _algo
: AlgoAdapterModelImpl
- _algorithmSet
: RequestFile
- _algs
: ConsensusAlgorithm
- _approach
: RocCurve
- _areaNotPredicted
: AreaStats
- _areaPredAbsent
: AreaStats
- _areaPredPresent
: AreaStats
- _areaTotal
: AreaStats
- _auc
: RocCurve
- _average_point
: EnvironmentalDistance
- _avg
: DistanceToAverage
- _background
: VirtualNicheGenerator
- _bestCost
: NicheMosaic
- _bestRun
: AbstractBestSubsets
, BestSubsets
- _bioclimHistogram
: Garp
- _cacheDir
: CacheManager
- _cachedOccs
: Garp
- _calc_covariance_matrix()
: EnvironmentalDistance
- _calcAuc
: RequestFile
- _calcConfusionMatrix
: RequestFile
- _calculateEnvelopes()
: AquaMaps
- _calculateGraphPoints()
: RocCurve
- _calculateTotalArea()
: RocCurve
- _callback_wrapper
: OpenModeller
- _category
: RocCurve
- _chrom1
: GarpRule
- _chrom2
: GarpRule
- _class_weights
: RfAlgorithm
- _commission
: AlgorithmRun
- _commission_samples
: AlgorithmRun
- _commissionSampleSize
: AbstractBestSubsets
, BestSubsets
- _commissionThreshold
: AbstractBestSubsets
, BestSubsets
- _confMatrix
: ConfusionMatrix
- _confusion_matrix
: OpenModeller
- _conv_limit
: DgGarpBestSubsets
, Garp
, GarpBestSubsets
- _convergence
: Garp
- _coord_system
: OccurrencesReader
- _count()
: FileParser
- _cov_matrix
: EnvironmentalDistance
- _cov_matrix_inv
: EnvironmentalDistance
- _crossover_rate
: Garp
- _curl_body_writer()
: GbifOccurrences
, TapirOccurrences
- _curl_header_writer()
: GbifOccurrences
, TapirOccurrences
- _curr_heur_count
: Garp
- _currentModelsUnderOmissionThreshold
: AbstractBestSubsets
, BestSubsets
- _dA
: Rule
- _data
: RocCurve
- _db
: TeOccurrences
- _default_alg_dir
: AlgorithmFactory
- _default_limit
: GbifOccurrences
, TapirOccurrences
- _deleteCallback
: Log
- _delta
: NicheMosaic
- _depend
: BioclimHistogram
- _dim
: RuleSet
- _dimensions
: Regression
- _dist
: DistanceToAverage
, MinimumDistance
- _distance()
: EnvironmentalDistance
- _dlls
: AlgorithmFactory
- _done
: AbstractBestSubsets
, BestSubsets
, Bioclim
, ConsensusAlgorithm
, Csm
, DistanceToAverage
, EnvelopeScore
, EnvironmentalDistance
, MinimumDistance
, NicheMosaic
, NNAlgorithm
, RfAlgorithm
, SvmAlgorithm
, VirtualNicheGenerator
- _drivers
: OccurrencesFactory
, RasterFactory
- _dSig
: Rule
- _endCapabilitiesElement()
: TapirOccurrences
- _endSearchElement()
: GbifOccurrences
- _ensureEnvelopeSize()
: AquaMaps
- _ensureInitialized()
: CacheManager
- _env
: OpenModeller
, SamplerImpl
- _environmentallyUnique
: RequestFile
- _environmentSet
: RequestFile
- _envPoints
: MinimumDistance
- _error
: OpenModeller
- _estimatedAreaStats
: OpenModeller
- _factory
: AlgorithmFactory::DLL
- _file
: AlgorithmFactory::DLL
- _finishedRun
: AbstractBestSubsets
, BestSubsets
- _fittest
: Garp
- _format
: OpenModeller
- _fp
: Settings
- _gapsize
: Garp
- _gen
: Garp
- _get()
: FileParser
- _getAll()
: FileParser
- _getAndCheckParameter()
: AquaMaps
- _getConfiguration()
: AbstractBestSubsets
, AlgorithmImpl
, AquaMaps
, BestSubsets
, Bioclim
, ConsensusAlgorithm
, Csm
, DistanceToAverage
, EnvelopeScore
, EnvironmentalDistance
, Garp
, GarpAlgorithm
, MinimumDistance
, NicheMosaic
, NNAlgorithm
, RfAlgorithm
, SvmAlgorithm
, VirtualNicheGenerator
- _getInstance()
: CacheManager
, Settings
- _getNode()
: SvmAlgorithm
- _getRelatedIndex()
: AquaMaps
- _gsl_avg_vector
: Csm
- _gsl_covariance_matrix
: Csm
- _gsl_eigenvalue_vector
: Csm
- _gsl_eigenvector_matrix
: Csm
- _gsl_environment_matrix
: Csm
- _gsl_stddev_vector
: Csm
- _gt
: Map
- _handle
: AlgorithmFactory::DLL
- _has_expert_range
: AquaMaps
- _has_guid
: CapabilitiesInfo
- _has_lat
: CapabilitiesInfo
- _has_long
: CapabilitiesInfo
- _has_name
: CapabilitiesInfo
- _hasCategorical
: MinimumDistance
- _hasExpertRange()
: AquaMaps
- _id
: AlgorithmRun
, AlgParameter
, DummyRule
- _ignoreAbsences
: ConfusionMatrix
- _improvements
: Garp
- _init_distance_type()
: EnvironmentalDistance
- _initialized
: ConsensusAlgorithm
, Csm
, Random
, RfAlgorithm
- _initiated
: OccurrencesFactory
, RasterFactory
- _inner_size
: AquaMaps
- _inputMask
: RequestFile
- _inputModelFile
: RequestFile
- _is_gbif
: ServiceInfo
- _is_tapir
: CapabilitiesInfo
- _isCategorical
: MinimumDistance
- _k
: RfAlgorithm
- _last_guid
: GbifRecordData
- _last_lg
: GbifRecordData
- _last_lt
: GbifRecordData
- _layer_count
: Csm
, EnvironmentalDistance
- _layers
: EnvironmentImpl
- _level
: Log
- _lgDataHandler()
: GbifOccurrences
- _loadConfig()
: Settings
- _loaded
: DelimitedTextOccurrences
, GbifOccurrences
, SerializedXmlOccurrences
, TapirOccurrences
, TeOccurrences
- _loadPredictions()
: RocCurve
- _localityCount
: Csm
- _logEnvelope()
: AquaMaps
- _lower_limit
: AquaMaps
- _lowerLevels
: BioclimHistogram
- _ltDataHandler()
: GbifOccurrences
- _mask
: EnvironmentImpl
- _matrix
: BioclimHistogram
- _max
: DistanceToAverage
, ScaleNormalizer
- _max_gen
: DgGarpBestSubsets
, Garp
, GarpBestSubsets
- _max_records
: CapabilitiesInfo
, ServiceInfo
- _maximum
: AquaMaps
, Bioclim
, EnvelopeScore
, NicheMosaic
, VirtualNicheGenerator
- _maxProgress
: AbstractBestSubsets
, BestSubsets
, Garp
, GarpAlgorithm
- _maxRecordsDataHandler()
: TapirOccurrences
- _maxThreads
: AbstractBestSubsets
, BestSubsets
- _mean
: Bioclim
, MeanVarianceNormalizer
, VirtualNicheGenerator
- _metadata
: AlgorithmFactory::DLL
, AlgorithmImpl
- _min
: DistanceToAverage
, ScaleNormalizer
- _minimum
: AquaMaps
, Bioclim
, EnvelopeScore
, NicheMosaic
, VirtualNicheGenerator
- _model_creation_arg
: CallbackWrapper
- _model_creation_callback
: CallbackWrapper
- _model_max_best
: NicheMosaic
- _model_min_best
: NicheMosaic
- _model_projection_arg
: CallbackWrapper
- _model_projection_callback
: CallbackWrapper
- _models
: AverageModelImpl
- _modelsUnderOmission
: AbstractBestSubsets
, BestSubsets
- _mortality
: Garp
- _mutation_rate
: Garp
- _my_absence_test
: NicheMosaic
- _my_presences
: NicheMosaic
- _my_presences_test
: NicheMosaic
- _needsEvaluation
: GarpRule
- _next
: GbifRecordData
, TapirRecordData
- _nn_parameter
: NNAlgorithm
- _no
: Rule
- _nonNativeProjection
: RequestFile
- _normalized
: SamplerImpl
- _normalizerPtr
: AlgorithmImpl
, EnvironmentImpl
, ScaledModelImpl
- _norms
: ConsensusAlgorithm
- _nparam
: BestSubsets
- _num_algs
: ConsensusAlgorithm
- _num_background
: VirtualNicheGenerator
- _num_background_points
: RocCurve
- _num_iterations
: NicheMosaic
- _num_layers
: NicheMosaic
, NNAlgorithm
, SvmAlgorithm
- _num_points
: NicheMosaic
- _num_points_absence_test
: NicheMosaic
- _num_points_test
: NicheMosaic
- _num_trees
: RfAlgorithm
- _numActiveRuns
: AbstractBestSubsets
, BestSubsets
- _numBestRuns
: AbstractBestSubsets
, BestSubsets
- _numFinishedRuns
: AbstractBestSubsets
, BestSubsets
- _numGenes
: GarpRule
- _numLayers
: MinimumDistance
- _numRules
: GarpRuleSet
- _occurrences
: GbifRecordData
, TapirRecordData
- _occurrencesSet
: RequestFile
- _offsets
: ScaleNormalizer
- _offspring
: Garp
- _omission
: AlgorithmRun
- _omissionThreshold
: AbstractBestSubsets
, BestSubsets
- _origin
: GarpRule
- _outputFormat
: RequestFile
- _outputMask
: RequestFile
- _outputModelFile
: RequestFile
- _p
: ReferenceCountedPointer< T >
- _par_dist
: EnvironmentalDistance
- _par_dist_type
: EnvironmentalDistance
- _par_point_qnt
: EnvironmentalDistance
- _param
: AlgorithmImpl
- _paramA
: Regression
- _paramB
: Regression
- _paramC
: Regression
- _parseCapabilities()
: TapirOccurrences
- _parser
: CapabilitiesInfo
, GbifRecordData
, ServiceInfo
- _parseServiceInfo()
: GbifOccurrences
- _pelagic
: AquaMaps
- _percentile()
: AquaMaps
- _performance
: GarpRule
- _pluginpath
: AlgorithmFactory
- _pochisq()
: EnvironmentalDistance
- _popsize
: DgGarpBestSubsets
, Garp
, GarpBestSubsets
- _poz()
: EnvironmentalDistance
- _prediction
: GarpRule
, RocCurve
- _predictionThreshold
: AreaStats
, ConfusionMatrix
- _pref
: Log
- _pref_maximum
: AquaMaps
- _pref_minimum
: AquaMaps
- _presence
: OpenModeller
, SamplerImpl
- _presence_count
: EnvironmentalDistance
- _presence_index
: SvmAlgorithm
- _presence_points
: EnvironmentalDistance
- _presences
: OccurrencesReader
, RequestFile
- _prev_heur_count
: Garp
- _progress
: AquaMaps
, NicheMosaic
, NNAlgorithm
- _projectionCategoricalMap
: RequestFile
- _projectionFile
: RequestFile
- _projectionMap
: RequestFile
- _projectionSet
: RequestFile
- _projEnv
: OpenModeller
- _proportions
: RocCurve
- _provider_limit
: GbifOccurrences
, TapirOccurrences
- _pXYs
: Rule
- _rand
: RfAlgorithm
- _randomNumberGenerator
: CsmBS
- _ratios
: RocCurve
- _readParameters()
: RequestFile
- _readSpeciesData()
: AquaMaps
- _ready
: ConfusionMatrix
, RocCurve
- _ref_count
: ReferenceCountedObject
- _regression
: Garp
- _resamples
: BioclimHistogram
, DgGarpBestSubsets
, Garp
, GarpBestSubsets
, Regression
- _resolution
: RocCurve
- _retained_components_count
: Csm
- _retrieveRecords()
: GbifOccurrences
, TapirOccurrences
- _roc_curve
: OpenModeller
- _rst
: Map
- _rules
: GarpRuleSet
- _running
: AlgorithmRun
- _samp
: AlgorithmImpl
, OpenModeller
- _sampleToLine()
: RfAlgorithm
- _sampp
: NicheMosaic
- _scale
: VirtualNicheGenerator
- _scales
: ScaleNormalizer
- _set
: RfAlgorithm
- _setAlgorithm()
: ConsensusAlgorithm
, RequestFile
- _setConfiguration()
: AbstractBestSubsets
, AlgorithmImpl
, AquaMaps
, BestSubsets
, Bioclim
, ConsensusAlgorithm
, Csm
, DistanceToAverage
, EnvelopeScore
, EnvironmentalDistance
, Garp
, GarpAlgorithm
, MinimumDistance
, NicheMosaic
, NNAlgorithm
, RfAlgorithm
, SvmAlgorithm
, VirtualNicheGenerator
- _setEnvironment()
: RequestFile
- _setOccurrences()
: RequestFile
- _setProjection()
: RequestFile
- _significance
: Garp
- _size
: AverageModelImpl
, GarpRuleSet
- _softOmissionThreshold
: AbstractBestSubsets
, BestSubsets
- _source
: OccurrencesReader
- _spatiallyUnique
: RequestFile
- _startCapabilitiesElement()
: TapirOccurrences
- _startSearchElement()
: GbifOccurrences
, TapirOccurrences
- _startServiceInfoElement()
: GbifOccurrences
- _std
: VirtualNicheGenerator
- _std_dev
: Bioclim
- _std_factor
: VirtualNicheGenerator
- _stddev
: MeanVarianceNormalizer
- _subAlgorithm
: AbstractBestSubsets
- _sum_weights
: ConsensusAlgorithm
- _svm_model
: SvmAlgorithm
- _svm_parameter
: SvmAlgorithm
- _svm_problem
: SvmAlgorithm
- _te_str_parser
: TeOccurrences
- _test_sampler
: AlgorithmRun
- _threshold
: VirtualNicheGenerator
- _thresholds
: ConsensusAlgorithm
, RocCurve
- _totalRuns
: AbstractBestSubsets
, BestSubsets
- _train_sampler
: AlgorithmRun
- _trainProp
: AbstractBestSubsets
, BestSubsets
- _trees
: RfAlgorithm
- _true_negatives
: RocCurve
- _true_positives
: RocCurve
- _upper_limit
: AquaMaps
- _upperLevels
: BioclimHistogram
- _use_absences_as_background
: RocCurve
- _use_chisq
: EnvironmentalDistance
- _use_layer
: AquaMaps
- _use_layer_as_ref
: ScaleNormalizer
- _use_surface_layers
: AquaMaps
- _value
: AlgParameter
- _weights
: ConsensusAlgorithm
- _writeData()
: RemoteRaster
- _xmax
: EnvironmentImpl
- _xmin
: EnvironmentImpl
- _ymax
: EnvironmentImpl
- _ymin
: EnvironmentImpl