#include <AlgorithmRun.hh>

Collaboration diagram for AlgorithmRun:

Public Member Functions
	AlgorithmRun (const AlgorithmPtr &algo)

	~AlgorithmRun ()

int	initialize (int id, int comm_samples, const SamplerPtr &train_sampler, const SamplerPtr &test_sampler)

void	run ()

void	stop ()

void	createModel ()

bool	running () const

int	getId () const

float	getProgress () const

double	getOmission () const

double	getCommission () const

double	getError (int type) const

Scalar	getValue (const Sample &x) const

int	calculateOmission ()

int	calculateCommission ()

AlgorithmPtr	getAlgorithm ()

	AlgorithmRun ()

	AlgorithmRun (const AlgorithmPtr &alg)

virtual	~AlgorithmRun ()

int	initialize (int id, int comm_samples, const SamplerPtr &train_sampler, const SamplerPtr &test_sampler, int nparam, AlgParameter param, BSAlgorithmFactory factory)

int	run ()

int	iterate ()

int	finalize ()

int	done () const

bool	running () const

int	getId () const

float	getProgress () const

double	getOmission () const

double	getCommission () const

double	getError (int type) const

Scalar	getValue (const Sample &x) const

AlgorithmPtr	getAlgorithm () const

int	calculateOmission ()

int	calculateCommission ()

Private Member Functions
	AlgorithmRun (const AlgorithmRun &)

AlgorithmRun &	operator= (const AlgorithmRun &)

	AlgorithmRun (const AlgorithmRun &)

AlgorithmRun &	operator= (const AlgorithmRun &)

Private Attributes
AlgorithmPtr	_alg
	Number of points used to calculate commission. More...

int	_id
	Algorithm used in this run. More...

bool	_running
	Identified for this particular garp run. More...

double	_omission
	Indicates whether the thread is running. More...

double	_commission
	Omission error for this run. More...

int	_commission_samples
	Commission error, approximated by area predicted present. More...

SamplerPtr	_train_sampler
	Number of points used to calculate commission. More...

SamplerPtr	_test_sampler

Detailed Description

Wraps up a single Algorithm run and its results (calculated error components). Also handles multi-threading aspects of computation.

Definition at line 47 of file AlgorithmRun.hh.

Constructor & Destructor Documentation

AlgorithmRun::AlgorithmRun ( const AlgorithmPtr & algo )

Definition at line 53 of file AlgorithmRun.cpp.

AlgorithmRun::~AlgorithmRun ( )

Definition at line 67 of file AlgorithmRun.cpp.

AlgorithmRun::AlgorithmRun ( const AlgorithmRun & )

private

AlgorithmRun::AlgorithmRun ( )

Definition at line 65 of file garp_run.cpp.

AlgorithmRun::AlgorithmRun ( const AlgorithmPtr & alg )

virtual AlgorithmRun::~AlgorithmRun ( )

virtual

AlgorithmRun::AlgorithmRun ( const AlgorithmRun & )

private

Member Function Documentation

int AlgorithmRun::calculateCommission ( )

Definition at line 130 of file AlgorithmRun.cpp.

References _alg, _commission, _commission_samples, and _train_sampler.

Referenced by AlgorithmRunThreadProc(), and createModel().

int AlgorithmRun::calculateCommission ( )

int AlgorithmRun::calculateOmission ( )

Definition at line 165 of file AlgorithmRun.cpp.

References _alg, _omission, _test_sampler, and _train_sampler.

Referenced by AlgorithmRunThreadProc(), and createModel().

int AlgorithmRun::calculateOmission ( )

void AlgorithmRun::createModel ( )

Definition at line 107 of file AlgorithmRun.cpp.

References _alg, _commission, _omission, _train_sampler, ConfusionMatrix::calculate(), calculateCommission(), calculateOmission(), ConfusionMatrix::getCommissionError(), and ConfusionMatrix::getOmissionError().

Referenced by AlgorithmRunThreadProc().

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int AlgorithmRun::done ( ) const

Definition at line 141 of file garp_run.cpp.

References _alg.

Referenced by AlgorithmRunThreadProc().

int AlgorithmRun::finalize ( )

Definition at line 149 of file garp_run.cpp.

References _running, and THREAD_END.

Referenced by AlgorithmRunThreadProc().

AlgorithmPtr AlgorithmRun::getAlgorithm ( ) const

inline

Definition at line 72 of file garp_run.hh.

References _alg.

AlgorithmPtr AlgorithmRun::getAlgorithm ( )

inline

Definition at line 73 of file AlgorithmRun.hh.

References _alg.

Referenced by BestSubsets::_getConfiguration(), and AbstractBestSubsets::_getConfiguration().

double AlgorithmRun::getCommission ( ) const

Definition at line 198 of file AlgorithmRun.cpp.

References _commission.

Referenced by printListOfRuns(), and BestSubsets::printListOfRuns().

double AlgorithmRun::getCommission ( ) const

double AlgorithmRun::getError ( int type ) const

Definition at line 202 of file AlgorithmRun.cpp.

References _commission, and _omission.

Referenced by AbstractBestSubsets::sortRuns(), and BestSubsets::sortRuns().

double AlgorithmRun::getError ( int type ) const

int AlgorithmRun::getId ( ) const

inline

Definition at line 63 of file AlgorithmRun.hh.

References _id.

Referenced by printListOfRuns(), and BestSubsets::printListOfRuns().

int AlgorithmRun::getId ( ) const

inline

Definition at line 66 of file garp_run.hh.

References _id.

double AlgorithmRun::getOmission ( ) const

Definition at line 194 of file AlgorithmRun.cpp.

References _omission.

Referenced by AbstractBestSubsets::numActiveThreads(), and BestSubsets::numActiveThreads().

double AlgorithmRun::getOmission ( ) const

float AlgorithmRun::getProgress ( ) const

Definition at line 126 of file AlgorithmRun.cpp.

References _alg.

Referenced by BestSubsets::getProgress(), and AbstractBestSubsets::getProgress().

float AlgorithmRun::getProgress ( ) const

double AlgorithmRun::getValue ( const Sample & x ) const

Definition at line 211 of file AlgorithmRun.cpp.

References _alg.

Referenced by BestSubsets::getValue(), and AbstractBestSubsets::getValue().

Scalar AlgorithmRun::getValue ( const Sample & x ) const

int AlgorithmRun::initialize	(	int	id,
		int	comm_samples,
		const SamplerPtr &	train_sampler,
		const SamplerPtr &	test_sampler
	)

Definition at line 73 of file AlgorithmRun.cpp.

References _commission_samples, _id, _test_sampler, and _train_sampler.

Referenced by BestSubsets::iterate(), and AbstractBestSubsets::iterate().

int AlgorithmRun::initialize	(	int	id,
		int	comm_samples,
		const SamplerPtr &	train_sampler,
		const SamplerPtr &	test_sampler,
		int	nparam,
		AlgParameter *	param,
		BSAlgorithmFactory *	factory
	)