CsmKG Class Reference
#include <csmkg.hh>
Inheritance diagram for CsmKG:
Collaboration diagram for CsmKG:
Public Member Functions | |
| CsmKG () | |
| ~CsmKG () | |
 Public Member Functions inherited from Csm | |
| Csm (AlgMetadata const *metadata) | |
| ~Csm () | |
| virtual int | initialize () |
| int | iterate () |
| int | done () const |
| Scalar | getValue (const Sample &x) const |
| int | getConvergence (Scalar *const val) const |
| Public Member Functions inherited from AlgorithmImpl | |
| AlgorithmImpl (AlgMetadata const *metadata) | |
| virtual | ~AlgorithmImpl () |
| void | setParameters (int nparam, AlgParameter const *param) |
| void | setParameters (const ParamSetType &) |
| std::string const | getID () const |
| AlgMetadata const * | getMetadata () const |
| AlgorithmPtr | getFreshCopy () |
| virtual int | supportsModelProjection () const |
| Model | createModel (const SamplerPtr &samp, CallbackWrapper *func=0) |
| void | setSampler (const SamplerPtr &samp) |
| virtual int | finalize () |
| virtual float | getProgress () const |
| virtual int | needNormalization () |
| Normalizer * | getNormalizer () const |
| void | setNormalization (const SamplerPtr &samp) const |
| void | setNormalization (const EnvironmentPtr &env) const |
| virtual Model | getModel () const |
| ConfigurationPtr | getConfiguration () const |
| void | setConfiguration (const ConstConfigurationPtr &) |
| Public Member Functions inherited from Configurable | |
| virtual | ~Configurable () |
Private Member Functions | |
| int | discardComponents () |
Additional Inherited Members | |
| Public Types inherited from AlgorithmImpl | |
| typedef std::map< icstring, std::string > | ParamSetType |
| Protected Member Functions inherited from Csm | |
| int | SamplerToMatrix () |
| bool | csm1 () |
| int | calculateMeanAndSd (gsl_matrix *theMatrix, gsl_vector *theMeanVector, gsl_vector *theStdDevVector) |
| int | center () |
| void | displayVector (const gsl_vector *v, const char *name, const bool roundFlag=true) const |
| void | displayMatrix (const gsl_matrix *m, const char *name, const bool roundFlag=true) const |
| gsl_matrix * | transpose (gsl_matrix *m) |
| double | product (gsl_vector *va, gsl_vector *vb) const |
| gsl_matrix * | product (gsl_matrix *a, gsl_matrix *b) const |
| gsl_matrix * | autoCovariance (gsl_matrix *m) |
| virtual void | _getConfiguration (ConfigurationPtr &config) const |
| virtual void | _setConfiguration (const ConstConfigurationPtr &config) |
| Protected Member Functions inherited from AlgorithmImpl | |
| int | dimDomain () |
| int | getParameter (std::string const &name, std::string *value) |
| int | getParameter (std::string const &name, double *value) |
| int | getParameter (std::string const &name, float *value) |
| int | getParameter (std::string const &name, int *value) |
| Protected Attributes inherited from Csm | |
| int | _initialized |
| int | _done |
| gsl_matrix * | _gsl_environment_matrix |
| gsl_matrix * | _gsl_covariance_matrix |
| gsl_vector * | _gsl_avg_vector |
| gsl_vector * | _gsl_stddev_vector |
| gsl_vector * | _gsl_eigenvalue_vector |
| gsl_matrix * | _gsl_eigenvector_matrix |
| int | _layer_count |
| int | _retained_components_count |
| int | _localityCount |
| int | minComponentsInt |
| bool | verboseDebuggingBool |
| Protected Attributes inherited from AlgorithmImpl | |
| SamplerPtr | _samp |
| Normalizer * | _normalizerPtr |
| ParamSetType | _param |
Detailed Description
Constructor & Destructor Documentation
| CsmKG::CsmKG | ( | ) |
Constructor for Csm
Constructor for CsmKG
- Parameters
-
Sampler is class that will fetch environment variable values at each occurrence / locality
Definition at line 117 of file csmkg.cpp.
References Csm::_initialized.
| CsmKG::~CsmKG | ( | ) |
Member Function Documentation
|
privatevirtual |
Discard unwanted components. This is a pure virtual function - it must be implemented by the derived class. Currently two derived classes are expected to be implemented - one for kaiser-gutman cutoff and one for broken-stick cutoff.
- Note
- This method must be called after center
- Returns
- 0 on error
Implements Csm.
Definition at line 139 of file csmkg.cpp.
References Csm::_gsl_eigenvalue_vector, Csm::_gsl_eigenvector_matrix, Csm::_layer_count, and Csm::_retained_components_count.
The documentation for this class was generated from the following files:
