#include <Rule.h>
Public Member Functions | |
| NegatedRangeRule () | |
| virtual | ~NegatedRangeRule () |
| virtual Rule * | objFactory () |
| virtual char | type () const |
| virtual void | fromString (char *strRule) |
| virtual bool | applyToCell (EnvCell *cell) |
| virtual double | getStrength (EnvCell *cell) |
| NegatedRangeRule () | |
| NegatedRangeRule (int numGenes) | |
| NegatedRangeRule (Scalar prediction, int numGenes, const Sample &chrom1, const Sample &chrom2, const double *performances) | |
| Constructor with setters. | |
| virtual | ~NegatedRangeRule () |
| virtual GarpRule * | objFactory () const |
| virtual char | type () const |
| virtual bool | applies (const Sample &sample) const |
| virtual int | getStrength (const Sample &sample) const |
| void | log () |
Detailed Description
Implements Garp Negated Range rules. They are simply a negation of an equivalent Range rule. Examples of Negated Range rules are:
IF NOT (temp between 10 and 20C) THEN sp=PRESENT IF NOT (temp between 10 and 20C AND elevation between 500 and 2000m) THEN sp=ABSENT
Constructor & Destructor Documentation
Definition at line 620 of file Rule.cpp.
Referenced by objFactory().
| NegatedRangeRule::~NegatedRangeRule | ( | ) | [virtual] |
| NegatedRangeRule::NegatedRangeRule | ( | int | numGenes | ) |
Definition at line 52 of file rules_negrange.cpp.
| NegatedRangeRule::NegatedRangeRule | ( | Scalar | prediction, |
| int | numGenes, | ||
| const Sample & | chrom1, | ||
| const Sample & | chrom2, | ||
| const double * | performances | ||
| ) |
Constructor with setters.
Definition at line 56 of file rules_negrange.cpp.
| virtual NegatedRangeRule::~NegatedRangeRule | ( | ) | [virtual] |
Member Function Documentation
| bool NegatedRangeRule::applies | ( | const Sample & | sample | ) | const [virtual] |
Reimplemented from RangeRule.
Definition at line 66 of file rules_negrange.cpp.
References GarpRule::_chrom1, GarpRule::_chrom2, GarpRule::_numGenes, between(), and equalEps().
| bool NegatedRangeRule::applyToCell | ( | EnvCell * | cell | ) | [virtual] |
Reimplemented from RangeRule.
Definition at line 629 of file Rule.cpp.
References Rule::Gene, Rule::iActiveGenes, Rule::iGeneIndex, Rule::intLength, GarpUtil::notBetween(), and EnvCell::values.
| void NegatedRangeRule::fromString | ( | char * | strRule | ) | [virtual] |
| int NegatedRangeRule::getStrength | ( | const Sample & | sample | ) | const [virtual] |
Reimplemented from RangeRule.
Definition at line 82 of file rules_negrange.cpp.
References getStrength().
| double NegatedRangeRule::getStrength | ( | EnvCell * | cell | ) | [virtual] |
| void NegatedRangeRule::log | ( | ) | [virtual] |
Reimplemented from RangeRule.
Definition at line 93 of file rules_negrange.cpp.
References Log::info(), and Log::instance().
| virtual GarpRule* NegatedRangeRule::objFactory | ( | ) | const [inline, virtual] |
Reimplemented from RangeRule.
Definition at line 67 of file rules_negrange.hh.
References NegatedRangeRule().
| virtual Rule* NegatedRangeRule::objFactory | ( | ) | [inline, virtual] |
Reimplemented from RangeRule.
Definition at line 151 of file Rule.h.
References NegatedRangeRule().
| virtual char NegatedRangeRule::type | ( | ) | const [inline, virtual] |
Reimplemented from RangeRule.
Definition at line 69 of file rules_negrange.hh.
| virtual char NegatedRangeRule::type | ( | ) | const [inline, virtual] |
The documentation for this class was generated from the following files:
